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​Why Working Out Can Sometimes Make Muscle Pain Worse

Writer: Julien Boillat
Julien Boillat
Sep 26
3 min read

We’ve all heard the golden rule of health: “When in doubt, move.”


If you are dealing with chronic fatigue, metabolic sluggishness, or general joint stiffness, working out is indeed one of the most powerful medicines on the planet. But if you have ever tried to "work through" a painful, inflamed muscle or tendon, you might have noticed something frustrating: sometimes, exercise makes the pain worse.


How can the exact same movement that heals one person cause a flare-up in another?

The answer lies in a single protein released by your muscles: a molecular double-agent called Interleukin-6 (IL-6).


The Heroic Side of Exercise: Muscle as a Hormone Factory


When you contract a healthy muscle—whether you’re walking, cycling, or lifting weights—your muscle fibers act like a chemical factory. They manufacture and release signaling molecules called myokines directly into your bloodstream.

The superstar of these myokines is IL-6.


When released by a healthy contracting muscle, IL-6 acts as a master regulator for your entire body:

* It burns fat: It tells your liver and fat cells to break down energy to fuel your workout.

* It clears blood sugar: It forces your muscles to suck up glucose without needing extra insulin.

* It cools down systemic inflammation: It signals your liver and immune system to release powerful anti-inflammatory molecules (like IL-10 and IL-1ra) that quiet down low-grade inflammation across your whole body.


In this scenario, IL-6 is an absolute hero. It is the reason regular physical activity protects against heart disease, diabetes, and even depression.


The Plot Twist: When Muscle Signalling Goes Rogue

So, if IL-6 is so great, why does strengthening a painful muscle sometimes cause a agonizing setback?


Because IL-6 has a dark twin.

When a muscle or tendon is already injured, micro-damaged, or chronically inflamed, its internal environment changes completely. Immune cells called macrophages flood the area to clean up damaged tissue.

When you force a damaged muscle to work too hard or too soon:

* Micro-tears release danger signals: The mechanical stress creates microscopic ruptures in the tissue, releasing "alarm molecules."

* Immune cells switch on: Macrophages in the muscle enter a high-alert, pro-inflammatory state.

* The "Trans-Signaling" Trap: Instead of releasing clean, healing IL-6 into the blood, the injured tissue clips off a special floating receptor (called sIL-6R). The IL-6 locks onto this floating receptor, turning what should be a healing signal into a pro-inflammatory weapon.

This hijacked signal spreads locally, sensitizing the surrounding nerve endings (making you feel sharp pain), slowing down tissue repair, and locking the muscle in a cycle of irritation.

Instead of building strength, you are essentially throwing gasoline onto a local cellular fire.


How to Turn the Healing Switch Back On

If you are dealing with a stubborn, inflamed muscle (X or Y), the goal isn't to stop moving entirely—it’s to change the type of signal you send to your cells.


Here is how modern sports physiology turns the "anti-inflammatory switch" back on:

* 1. Switch to Isometrics (Hold, Don't Move): Dynamic exercises (like jumping or heavy eccentric lowering) cause shearing forces that tear fragile tissue. Holding a static position against moderate resistance (an isometric hold for 30–45 seconds) forces blood flow into the muscle without tearing the tissue, bypassing the pro-inflammatory trap and numbing local pain nerves.

* 2. Train Around the Injury: You don't need to stress an injured shoulder or knee to get the systemic benefits of exercise. Working out your uninjured limbs or doing easy cardio (Zone 2) releases healthy, anti-inflammatory IL-6 from your healthy muscles, which travels through your blood to help cool down the fire everywhere else.

* 3. Avoid Working to Failure: Pushing an inflamed muscle until it burns uncontrollably floods the cells with free radicals (oxidative stress). Keep your efforts controlled and well short of exhaustion.


The Takeaway

Exercise isn't just about burning calories or breaking down muscle fibers—it is a language of chemical signals.

When your muscles are healthy, exercise speaks the language of repair and vitality. But when a muscle is injured, demanding too much too soon causes the body to misinterpret the message.

Listen to the signal, adjust the type of movement, and give your cellular machinery the right environment to rebuild.


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